Author(s)	Title	Reference	Data
Jennifer E. Buhay and Keith A. Crandall	Subterranean phylogeography of freshwater crayfishes shows extensive gene flow and surprisingly large population sizes	Molecular Ecology 14(2005): 4259-4273	-
Savel R. Daniels, Neil J.L. Heideman, Martin G.J. Hendricks, Mphalile E. Mokone,Keith A. Crandall	Unraveling evolutionary lineages in the limbless fossorial skink genus Acontias (Sauria: Scincidae): are subspecies equivalent systematic units?	Molecular Phylogenetics and Evolution 34(2005) 645-654	-
Porter, M. L., M. Perez-Losada, and K. A. Crandall	Model based multi-locus estimation of Decapod phylogeny and divergence times	Molecular Phylogenetics and Evolution 37 (2005): 355–369
Schull, H. C., M. Pérez-Losada, D. Blair, K. Sewell, E. A. Sinclair, S. Lawler, M. Ponniah, and K. A. Crandall	Phylogeny and biogeography of the freshwater crayfish Euastacus (Decapoda: Parastacidae) based on nuclear and mitochondrial DNA.	Molecular Phylogenetics and Evolution 37 (2005): 249–263	-
Rader, R. B., M. C. Belk, D. K. Shiozawa, and K. A. Crandall	Empirical tests for ecological exchangeability.	Animal Conservation (2005) 8: 239-247	-
Martin, D. P., C. Williamson, and D. Posada	RDP2: Recombination detection and analysis from sequence alignments.	Bioinformatics (2005) 21:260-262	-
Martin, D. P., D. Posada, K. Crandall, and C. Williamson	A modified bootscan algorithm for automated identification of recombinant sequences and recombination breakpoints.	AIDS Research and Human Retroviruses (2005) 21:98-102	-
Carvajal-Rodríguez A, Crandall KA, Posada	Caracterización y modelado computacional de la recombinación en secuencias de ADN en el virus del SIDA (VIH-1)	Biojournal 2( May 2005) (http://www.biojournal.net)	-
Pérez-Losada, M., R. P. Viscidi, J. C. Demma, J. Zenilman, and K. A. Crandall	Population genetics of Neisseria gonorrhoeae in a high prevalence community using a hyper-variable outer membrane porB and thirteen slow-evolving housekeeping genes.	Molecular Biology and Evolution : 22(9):1887–1902. 2005	-
Sinclair, E. A., M. Pérez-Losada, and K. A. Crandall	Molecular phylogenetics for conservation biology.	In Phylogeny and Conservation(ed. J. L. Gittleman & A. Purvis), Pp. 19-56. Cambridge: Cambridge University Press.	-
Lewis-Rogers, N., K. A. Crandall, and D. Posada	Evolutionary analyses of genetic recombination	Pp. 49-78 in V. Parisi, V. De Fonzo, and F. Aluffi-Pentini, eds. Dynamical Genetics. Research Signpost, Kerala, India	-
Crandall, K. A., M. Pérez-Losada, R. G. Christensen, D. A. McClellan, and R. P. Viscidi	Phylogenomics and Molecular Evolution of Polyomaviruses.	In Polyomavirus and Human Diseases (Ed. Nasimul Ahsan), Pp. 1-13. Landes Biosciences, Georgetown, TX.	-

2004 Publications

Author(s)	Title	Reference	Data
Keith A. Crandall, Jennifer E. Buhay	Genomic Databases and the Tree of Life	Science 306: 1144-1145	-
Nicole Lewis-Rogers, Keith A. Crandall, David Posada	Evolutionary analyses of genetic recombination	Dynamical Genetics 2004:49-78	-
Rambaut, A., D. Posada, Crandall K. A.	The causes and consequences of HIV evolution	Nature Review Genetics 5:52-61	-
Sinclair, E. A., R. L. Bezy, K. Bolles, J. L. R. Camarillo, K. A. Crandall and J. W. Sites, Jr.	Testing species boundaries in an ancient species complex with deep phylogeographic history: genus Xantusia (Squamata: Xantusiidae)	American Naturalist 164(3):396-414	-
Tarjuelo, I., D. Posada, K. Crandall, M. Pascual, and X. Turon	Phylogeography and speciation of colour morphs in the colonial ascidian Pseudodistoma crucigaster.	Molecular Ecology 13:3125-3136	-
Pérez-Losada M., G. Bond-Buckup, C. G. Jara, and K. A. Crandall	Molecular systematics and biogeography of the Southern South American Freshwater "crabs" Aegla (Decapoda: Anomura: Aeglidae) using multiple heuristic tree search approaches.	Systematic Biology 53(5):1-14	-
Sinclair, E. A., J. W. Fetzner, Jr., J. Buhay, and K. A. Crandall	Proposal to complete a phylogenetic taxonomy and systematic revision for freshwater crayfish (Astacida).	Freshwater Crayfish 14:21-29	-
Agapow, P. M., O.R.P. Bininda-Emonds, K. A. Crandall, J. L. Gittleman, G. M. Mace, J. C. Marshall, and A. Purvis	The impact of species concept on biodiversity studies.	Quarterly Review of Biology 79(2):161-179	-
Pérez-Losada M., Høeg J. T., Crandall K.A.	Unraveling the evolutionary radiation of the Thoracican barnacles using molecular and morphological evidence: a comparison of several divergence time estimation approaches.	Systematic Biology 53(2):244-264	-
Devon E. Pearse and Keith A. Crandall	Beyond FST: Analysis of population genetic data for conservation	Conservation Genetics 5:585-602	-
Abdo Z, Crandall, K.A., Joyce P.	Evaluating the performance of likelihood methods for detecting population structure and migration	Molecular Ecology 13:837-851	-

2003 Publications

Author(s)	Title	Reference	Data
Jara, C. G., M. Pérez-Losada, Crandall K. A.	Aegla occidentalis (Crustacea: Decapoda: Aeglidae), a new species of freshwater crab from the Nahuelbuta Costal Range, Chile	Proceedings of the Biological Society of Washington 116(4):933-942	-
Sinclair, E.A., H.L. Black, Crandall K.A.	Population structure and paternity in an American Black Bear (Ursus americanus) population using microsatellite DNA	Western North American Naturalist 63(4)489-497	-
Porter, M.L., Crandall K.A.	Lost along the way: The significance of evolution in reverse.	Trends in Ecology and Evolution 18(10):541-547	-
Fetzner, J.W. Jr., Crandall K.A.	Linear habitats and the nested clade analysis: An empirical evaluatoin of geographic vs. river distances using an Ozark crayfish (Decapoda: Cambaridae).	Evolution 57(9):2101-2118	-
Pérez-Losada, M., Crandall K.A.	Can taxonomic richness be used as a surrogate for phylogenetic distinctness indices for ranking areas for conservation?	Animal Biodiversity and Conservation 26:77-84	-
Woolley, S., J. Johnson, M.J. Smith, K.A. Crandall, D.A. McClellan	TreeSAAP: Selection on Amino Acid Properties using phylogenetic trees.	Bioinformatics 19:671-672	-

2002 Publications

Author(s)	Title	Reference	Data
Posada, D., , K.A. Crandall, E.C. Holmes	Recombination in Evolutionary genomics.	Annual Review of Genetics 36:75-97	-
Crandall, K. A.	Crayfish as model organisms.	Freshwater Crayfish 13:3-10	-
Perez-Losada, M., C.G. Jara, G. Bond-Buckup, M.L. Porter and K.A.Crandall	Anomuran Phylogenetic relationships: on the taxonomic positiosing of Aeglidae freshwater crabs	Journal of Crustacean Biology 22(3):670-676	-
Perez-Losada, M., J.T. Høeg, G.A. Kaolbasov, K.A. Crandall	Reanalysis of the relationships among the Cirripedia and the Ascothoracida and the phylogenetic position of the Facetotecta (Maxillopoda: Thecostraca) using 18srDNA sequences.	Journal of Crustacean Biology 22(3):661-669	-
Perez-Losada, M., C.G. Jara, G. Bond-Buckup, and K.A.Crandall	Phylogenetic relationships among the species of Aegla (Anomura: Aeglidae) freshwater crabs from Chile.	Journal of Crustacean Biology 22(2):304-313	-
Sinclair, E.A., Costello, B., Courtenay, J.M. and K.A. Crandall	Detecting a genetic bottleneck in Gilbert's Potoroo (Potorous gilbertii) (Marsupialia: Potoroidae), inferred from microsatellite and mitochondrial DNA sequnce data.	Conservation Genetics 3:191-196	-
Perez-Losada, M., C.G. Jara, G. Bond-Buckup and K.A. Crandall	Conservation phylogenetics of Chilean freshwater crabs Aegla (Anomura, Aeglidae): Assigining priorities for aquatic habitat protections	Biological Conservation 105:345-353	-
Posada, D., and Crandall, K.A.	The effect of recombination on the accuracy of phylogeny estimation.	Journal of Molecular Evolution 54:396-402	-
Crandall, K.A., Posada, D.	Phylogenetic Approaches to Molecular Epidemiology	The Molecular Epidemiolgy of Human Viruses Kluwer Academic Publishers	-

2001 Publications

Author(s)	Title	Reference	Data
Posada, D. and Crandall, K.A.	Evaluation of methods for detecting recombination from DNA sequences using computer simulations	PNAS 98(24):13757-13762.	-
Tarjuelo, I., Posada, D., Crandall, K.A., Pascual, M., and Turon, X.	Cryptic species of Clavelina (Ascidiacea) in two different habitats: harbours and rocky littoral zones in the northwestern Mediterranean.	Marine Biology 139:455-462	-
Posada, D., and Crandall, K.A.	A comparison of different strategies for selecting models of DNA subsitution.	Systematic Biology 50(4):580-601	-
Sinclair, E. A., Swenson, E., Bates, W., Choate, D., Wolf, M., and Crandall, K. A.	Gene flow estimates in Utah's cougars imply management beyond Utah.	Animal Conservation 4: 257-264.	-
Harris, D.M., J.C. Marshall, and K.A. Crandall	Squamate relationships based on C-Mos nuclear DNA sequences: increased taxon sampling improves bootstrap support.	Amphibia-Reptilia 22:235-242	-
Posada, D. and K.A. Crandall.	Selecting models of nucleotide substitution: An application to Human Immunodeficiency Virus 1 (HIV-1).	Molecular Biology and Evolution 18(6):897-906.	-
Posada, D. and K.A. Crandall.	Simple (wrong) models for complex trees: A case from the Retroviridae.	Molecular Biology and Evolution 18(2):271-275.	-
Imamichi, H., K. A. Crandall, V. Natarajan, M.K. Jiang, R. L. Dewar, S. Berg, A. Gaddam, M. Bosche, J. A. Metcalf, R. T. Davey, Jr., and H.C. Lane	Human Immunodeficiency Virus Type 1 quasi species that rebound after discontinuation of highly active antiretroviral therapy are similar to the viral quasi species present before Initiation of therapy.	The Journal of Infectious Diseases 183:36–50.	-
Posada, D. and K.A. Crandall.	Intraspecific gene genealogies: trees grafting into networks.	Trends in Ecology and Evolution 16(1):37-45.	-
Crandall, K.A.	Human Immunodeficiency Viruses (HIV).	Encyclopedia of Life Sciences NPG	-
Fetzner, J.W. Jr., Crandall, K.A.	Genetic Variation. In : Biology of freshwater crayfish, (ed. D.M. Holdich)	pp. 291-326. Blackwell Science, Oxford.	-
Posada, D. and K.A. Crandall.	Selecting models of nucleotide substitution: An application to Human Immunodeficiency Virus 1 (HIV-1).	Molecular Biology and Evolution 18(6):897-906	-
Posada, D. and K.A. Crandall and D.M. Hillis	Phylogenetics of HIV. In: Computational and Evolutionary Analysis of HIV Molecular Sequences	pp. 121-160. Kluwer Academic Publishers.	-
Vasco, D.A., K.A. Crandall and Y.X. Fu.	Molecular population genetics: coalescent methods based on summary statistics. In: Computational and Evolutionary Analysis of HIV Molecular Sequences	pp. 173-216. Kluwer Academic Publishers.	-
Sinclair, E. A.	Phylogeographic variation in the quokka, Setonix brachyurus (Marsupialia: Macropodiadae).	Animal Conservation 4:325-333	-
Engel, A.S., Porter, M.L., Kinkle, B.K., and Kane, T.C.	Ecological Assessment and Geological Significance of Microbial Communities from Cesspool Cave, Virginia	Geomicrobiology Journal 18:259-274	-
Crandall, K.A.	Phylogeny. In: Encyclopedia of Genetics (Brenner, S. & Miller J.H., eds)	pp.1465-1466. Academic Press, London	-
Sinclair, E.A.	Microgeographic variation in two relict island populations of the quokka, Setonix brachyurus (Macropodidae: Marsupialia), assessed by allozyme electrophoresis	JRSWA 84:111-116	-

2000 Publications

Author(s)	Title	Reference	Data
Matala, E., K.A. Crandall, R.C. Baker and N. Ahmad	Limited heterogeneity of HIV type 1 in infected mothers correlates with lack of vertical transmission.	AIDS Research and Human Retroviruses 16:1481-1490.	-
Clement, M., D. Posada and K. A. Crandall.	TCS: a computer program to estimate gene genealogies.	Molecular Ecology 9:1657-1659.	-
Smith, K., K.A. Crandall, M.L. Kneissl and B.A. Navia	PCR detection of host and HIV-1 sequences from archival brain tissue.	Journal of Neurovirology 6:(2):164-171	-
Grandjean, F., Harris, D. J., Souty-Grosset, C. & Crandall, K. A.	Systematics of the European endangered crayfish species, Austropotamobius pallipes (Decapoda: Astacidae).	Journal of Crustacean Biology 20(3), 522-529.
Crandall, K. A., Harris, D. J. and Fetzner, J. W	The monophyletic origin of freshwater crayfishes estimated from nuclear and mitochondrial DNA sequences.	Proceedings of the Royal Society of London, Series B 267:1679-1686.
Crandall, K. A., Fetzner, J. W., Jr., Jara, C. G. and Buckup, L	On the phylogenetic positioning of the South American freshwater crayfish genera (Decapoda: Parastacidae).	Journal of Crustacean Biology 20: 530-540.	-
Whiting, A.S., S.H. Lawler, P. Horwitz, & K.A. Crandall.	Biogeographic regionalization of Australia: assessing conservation priorities based on endemic freshwater crayfish phylogenetics.	Animal Conservation 3: 155-163.
Peters, A. A., M. B. Coulthart, J. J. F. Oger, D. J. Waters, K. A. Crandall, R. H. Ward and G. A. Dekaban.	HTLV-I and HTLV-II in British Columbia Amerindians: seroprevalence in the Nuu-Chah-Nulth and molecular characterisation of a Coast Salish HTLV-IIa isolate.	AIDS Research and Human Retroviruses 16(9):883-892.	-
Posada, D., K.A. Crandall, and A.R. Templeton.	GeoDis: A program for the cladistic nested analysis of the geographical distribution of genetic haplotypes.	Molecular Ecology 9: 487-488	-
Posada, D.K., K.A. Crandall, M. Nguyen, J.C. Demma, and R.P. Viscidi	Population genetics of the porB gene of Neisseria gonorrheae.	Molecular Biology and Evolution 17(3):423-436
Crandall, K.A., O.R.P. Bininda-Emonds, G.M. Mace and R.K. Wayne.	Considering evolutionary processes in conservation biology.	Trends in Ecology and Evolution 15(7):290-295.
Harris, D.J. and K.A. Crandall	Intra-genomic variation within ITS1 and ITS2 of crayfish (Decapoda: Cambaridae): implication for phylogenetic and microsatellite studies	Molecular Biology and Evolution 17(2)284-291
Harris, D. J., Maxson, L., Braithwaite, L. F. & Crandall, K. A.	Phylogeny of the Thoracican barnacles based on 18S rDNA sequences.	Journal of Crustacean Biology 20(2): 393-398.

1999 Publications

Author(s)	Title	Reference	Data
Vilá, C., I.R. Amorim, J.A. Leonard, D. Posada, J. Castroviejo, F. Petrucci-Fonseca, K.A. Crandall, H. Ellegren, and R.K. Wayne.	Mitochondrial DNA phylogeography and population history of the Grey Wolf Canis lupus.	Molecular Ecology 8:2089-2103.	-
Fetzner, J.W., Jr. and K.A. Crandall.	Genetic Variability within and among Populations of the Golden Crayfish (Orconectes luteus): A comparison using amplified fragment length polymorphisms (AFLP) and mitocondrial 16s gene sequences.	Freshwater Crayfish 12: 396-412.	-
Harris, D. J., E. A. Sinclair, N. L. Mercader, J. C. Marshall and K. A. Crandall	Squamate relationships based on C-mos nuclear DNA sequences.	Herpetological Journal 9:147-151.	-
Crandall, K. A., Posada, D. & Vasco, D.	Effective population sizes: missing measures and missing concepts.	Animal Conservation 2:317-319.	-
Kelsey, C.R., K.A. Crandall, and A.F. Voevodin.	Different models, different trees: The geographic origin of PTLV-1.	Molecular Phylogenetics and Evolution. 13: 336-347.	-
Crandall, K.A., D.Vasco, D. Posada, and H. Imamichi.	Advances in understanding the evolution of HIV.	AIDS 13(Suppl A):S39-S47.	-
Shapshak, P., D.M. Segal, K.A. Crandall, B.T. Zhang, R.K. Fujimura, K. Goodkin, K.Q. Xin, K. Okuda, C.K. Petito, and C. E. Eisdorfer.	Independent Evolution of HIV Type 1 in Different Brain Regions AIDS	Research and Human Retroviruses. 15: 811-820.	-
Crandall, K.A., J.W. Fetzner Jr., S.H. Lawler, M. Kinnersley, and C. M. Austin.	Phylogenetic Relationships Among the Australian and New Zealand Genera of Freshwater Crayfish.	Australian Journal of Zoology. 47: 199-214.
Crandall, K.A. and A.R. Templeton	The zoogeography and centers of origin of the crayfish subgenus Procericambarus (Decapoda: Cambaridae).	Evolution 53(1): 123-134.	-
Crandall, K.A. (Editor)	The Evolution of HIV.	Johns Hopkins Universtiy Press, Baltimore, MD	-
Crandall, K.A.	Uses of statistical parsimony in HIV analyses. Pp. In: Statistics in Molecular Biology, F. Seillier-Moiseiwitsch, ed. Institute of Mathematical Statistics and the American Mathematical Society, Hayward, CA.		-
Sinclair, E. A.	Morphological variation among populations of the quokka, Setonix brachyurus (Macropodidae: Marsupialia) in Western Australia.	Australian Journal of Zoology. 46: 439-449.	-

1998 Publications

Author(s)	Title	Reference	Data
Castilla, A. M., Fernandez-Pedrosa, V., Harris D. J., Gonzalez, A. Latorre, A. and Moya, A.	Mitochondrial DNA divergence suggest Podarcis hispanica atrata (Lacertidae) from the Columbretes Islands merits specific distinction.	Copeia 4:1037-1040.	-
Crandall, K.A.	Conservation phylogenetics of Ozark crayfishes: assigning priorities for aquatic habitat protection.	Biological Conservation 84:107-117.	-
Fujimura, R.K., P. Shapshak, D.M. Segal, K.A. Crandall, K. Goodkin, J.B. Page, R. Douyon, B.T. Zhang, K.Q. Xin, P. Rodriguez de la Vega, I. Nagano, and A. Sivastava.	Viral and host determinants of neurovirulence of HIV-1 infection.	Advances in Experimental Medicine and Biology, 437:241-253.	-
Goodkin, K., P. Shapshak, L.R. Metsch, C.B. McCoy, K.A. Crandall, M. Kumar, R.K. Fugimura, V. McCoy, B.T. Zhang, S. Reyblat, K.Q. Xin, A.M. Kumar.	Cocaine abuse and HIV-1 infection: Epidemiology and neuropathogenesis.	Journal of Neuroimmunology 83:88-101.	-
Lawler, S. H., and K. A. Crandall.	The relationship of the Australian freshwater crayfish genera Euastacus and Astacopsis.	Proceedings of the Linnean Society of New South Wales 119:1-8.	-
Posada, D., and K. A. Crandall.	Modeltest: Testing the model of DNA substitution.	Bioinformatics 14: 817-818.	-
Sinclair, E. A.	Morphological variation among populations of the quokka, Setonix brachyurus (Macropodidae: Marsupialia), in Western	Australia. Australian Journal of Zoology 46:439-449.	-

1997 Publications

-Author(s)	Title	Reference	Data
Crandall, K. A.	The crayfish component to an endangered aquatic ecosystem of the Southeast United States.	Freshwater Crayfish 11:83-86.	-
Crandall, K. A.	Genetic variation within and among crayfish species.	Freshwater Crayfish 11:135-145	-
Crandall, K. A. and T. W. Cronin.	The molecular evolution of visual pigments of freshwater crayfishes (Decapoda: Cambaridae).	Journal of Molecular Evolution 45:524-534.	-
Crandall, K.A. and D.M. Hillis.	Rhodopsin evolution in the dark.	Nature 387:667-668.	-
Fetzner, J. W., Jr., R. J. Sheehan and L. W. Seeb.	Genetic implications of broodstock selection for crayfish aquaculture in the Midwestern United States.	Aquaculture 154:39-55	-
Annual Review of Ecology and Systematics 28:437-466.	Phylogeny estimation and hypothesis testing using maximum likelihood.	Annual Review of Ecology and Systematics 28:437-466.	-
Segal, D. M., P. Shapshak, B.-T. Zhang, K. A. Crandall, B. Page, R. Fujimura, K. Goodkin, R. Douyon, and C. B. McCoy.	Novel tetrameric tip motifs (APGK and VPGK) in the V3 loop of HIV type 12 envelope sequences in blood and brain from two injection drug users in Miami, Florida.	AIDS Research and Human Retroviruses 13:1643-1646.	-
Sinclair, E. A. and M. Westerman.	The molecular relationship of Gilbert's Potoroo (Marsupialia: Potoroidae).	Journal of Mammalian Evolution 4:147-161.	-
Sites, J. W. Jr., and K. A. Crandall.	Testing species boundaries in biodiversity studies.	Conservation Biology 11(6):1289-1297.	-
Vilá, C. J. Maldonado, I. R. Amorim, R. K. Wayne, K. A. Crandall, and R. L. Honeycutt.	Man and his dog.	Science 278:205-207.	-
Vila, C., P. Savolainen, J. E. Maldonado, I. R. Amorim, J. E. Rice, R. L. Honeycutt, K. A. Crandall, J. Lundeberg, and R. K. Wayne.	Multiple and ancient origins of the domestic dog.	Science 276:1687-1689.	-

1996 Publications

-Author(s)	Title	Reference	Data
Crandall, K. A.	Identifying links between genotype and phenotype using marker loci and candidate genes. Pp. 137-157. In: The Impact of Plant Molecular Genetics,	B. W. S. Sobral, ed. Birkhäuser, Boston.	-
Crandall, K. A.	Multiple Interspecies Transmissions of Human and Simian T-Cell Leukemia/Lymphoma Virus Type I Sequences.	Molecular Biology and Evolution 13(1):115-131.	-
Crandall, K. A. and T. W. Cronin.	Opsin evolution in crayfishes: Effects of functional constraints. Pp. 19-27. In: Current Issues in Molecular Evolution, M. Nei and N. Takahata, eds.	Institute of Molecular Evolutionary Genetics, The Pennsylvania State University.	-
Crandall, K. A. and J. F. Fitzpatrick, Jr.	Crayfish molecular systematics: Inferences using a combination of procedures to estimate phylogeny.	Systematic Biology 45(1):1-26.
Crandall, K. A. and A. R. Templeton	Applications of intraspecific phylogenetics. Pp. 81-99. In: New Uses for New Phylogenies, P. H. Harvey, A. J. Leigh Brown, and J. Maynard Smith, eds.	Oxford University Press.	-
Fetzner, J. W., Jr.	Biochemical systematics and evolution of the crayfish genus Orconectes (Decapoda: Cambaridae).	Journal of Crustacean Biology 16(1): 111-141.	-
Shapshak, P., K. A. Crandall, K.-Q. Xin, K. Goodkin, R. Fujimura, W. Bradley, C. McCoy, I. Nagano, M. Yoshioka, C. Petito, N. Sun, A. Srivastava, N. Weatherby, R. Stewart, S. Delgado, A. Matthews, R. Douyon, K. Okuda, J. Yang, B. Zhang, X. Cao, S. Shatkovsky, J. Fernandez, S. Shah, and J. Perper.	HIV-1 neuropathogenesis and abused drugs: current views, problems, and solutions.	Advances in Experimental Medicine and Biology 402:171-186	-
Sinclair, E. A., Danks, A. and Wayne, A. F.	Rediscovery of Gilbert's Potoroo, Potorous tridactylus Western Australia.	Australian Mammalogy 19:69-72.	-
Sinclair, E. & K. Morris	Where have all the quokkas gone?	Landscope (Summer):49-53.	-
Sinclair, E. A., Webb, N. J., Marchant, A. D. and Tidemann, C. R	Determination of genetic variation in the Little Red Flying-fox, Pteropus scapulatus (Chiroptera: Pteropodidae): implications for management.	Biological Conservation 76:45-50.	-
Voevodin, A., K. A. Crandall, P. Seth, and S. A. Mufti.	HIV type 1 subtypes B and C from new regions of India and Indian and Ethiopian expatriates in Kuwait.	AIDS Research and Human Retroviruses 12(7):641-643	-

1995 Publications

-Author(s)	Title	Reference	Data
Chang, B. S. W., K. A. Crandall, J. P. Carulli, and D .L. Hartl.	Opsin phylogeny and evolution: Implications for wavelength regulation.	Molecular Phylogenetics and Evolution 4(1):31-43.	-
Crandall, K. A.	Intraspecific phylogenetics: Statistical support for dental HIV transmission.	Journal of Virology 69(4):2351-2356	-
Crandall, K. A.	Intraspecific cladogram estimation. Pp. 19-22. In: Proceedings of Phylogeny Workshop, Technical Report 95-48, S. Tavaré, ed.	DIMACS, New Jersey.	-
Crandall, K. A., S. H. Lawler, and C. Austin.	A preliminary examination of the molecular phylogenetic relationships of the crayfish genera of Australia (Decapoda: Parastacidae).	Freshwater Crayfish 10:18-30.	-
Shapshak, P., I. Nagano, K. Xin, W. Bradley, N. C. J. Sun, R. V. Stewart, M. Yoshioka, C. Petito, K. Goodbin, R. Douyon, A. K. Srivagtava, and K. A. Crandall.	HIV-1 Heterogeneity and Cytokines: Neuropathogenesis.	Advances in Experimental Medicine and Biology 373:225-238.	-
Start, T., A. Burbidge, E. Sinclair & A. Wayne	Lost and Found - Potoroos.	Landscope (Autumn): 28-33.	-
Thorpe, J.P., J. Smartt, A. L. Allcock, M. Chauvet, K. A. Crandall, D. R. Given, S.J.G. Hall, J.M. Iriondo, T.M. Lewinsohn, S.M. Lynch, G.M. Mace, A.M. Sole-Cava, E. Stackebrandt, A.R. Templeton, and P.C. Watts	"Genetic diversity as a component of biodiversity." Pp. 57-87. In: Global Biodiversity Assessment, V.H. Heywood and R. T. Watson, eds.	Cambridge University Press, Cambridge.	-
Xin, K-Q, X-H Ma, K. A. Crandall, H. Bukawa, Y. Ishigatsubo, S. Kawamoto, and K. Okuda.	Dual infection with HIV-1 Thai subtype B and E.	The Lancet 346:1372-1373.	-

1994 Publications

-Author(s)	Title	Reference	Data
Crandall K. A.	Intraspecific cladogram estimation: Accuracy at higher levels of divergence.	Systematic Biology 43(2): 222-235.	-
Crandall, K. A., A. R. Templeton, and C. F. Sing.	Intraspecific phylogenetics: Problems and solutions. Pp. 273-297 In: Models in Phylogeny Reconstruction (R.W. Scotland, D. J. Siebert, and D. M. Williams, eds.).	Systematics Association Special Volume, Clarendon Press, Oxford, England. (ASIN: 0198548249)	-
Krajewski, C. and J. W. Fetzner Jr.	Phylogeny of cranes (Gruiformes: Gruidae) based on cytochrome-b DNA sequences.	The Auk 111(2): 351-365	-
Krajewski, C. and J. W. Fetzner Jr.	Ancient DNA from the cuban sandhill crane.	The Ancient DNA Newsletter 1(2): 24-25	-

1993 Publications

-Author(s)	Title	Reference	Data
Crandall, K. A. and A. R. Templeton.	Empirical tests of some predictions from coalescence theory.	Genetics 134:959-969.	-

1992 Publications

-Author(s)	Title	Reference	Data
Templeton, A. R., K. A. Crandall, and C. F. Sing.	A cladistic analysis of phenotypic associations with haplotypes inferred from restriction endonuclease mapping and DNA sequence data. III. Cladogram estimation.	Genetics 132:619-633.	-